PPDB

 The Plant Proteome Database

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AT5G40020.1   Pathogenesis-related thaumatin superfamily protein
Lab Annot.
Mapman: 20.1 stress.biotic
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G18250.1 11Arabidopsis thaliana7E-7022946608 (1)S
AT1G18250.2 11Arabidopsis thaliana9E-7022447618 (1)S
AT4G38660.1 11Arabidopsis thaliana6E-6925642570 (0)M
Os10g27280.1 7Oryza sativa5E-8423954660 (0)S
Os09g32280.1 7Oryza sativa7E-7024045590 (0)S
Os06g47600.1 7Oryza sativa2E-6824042590 (0)S
GRMZM2G064605_P01 3.21Zea mays9E-9425653680 (0)M
Zm00001eb048140_P001 agpv5Zea mays9E-9425653680 (0)M
v1_GRMZM2G064605_P01 4a53Zea mays9E-9425653680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Thaumatin(1)
TargetP: Secreted (Class 1 C0.025; M0.022; S0.917; _0.092)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 256 aa (-cTP 237)
Molecular Weight 28.09 kDA(-cTP )
PI 8.05(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help