PPDB

PPDB	The Plant Proteome Database

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AT5G40010.1 AAA-ATPase 1

Lab Annot.

Mapman: 29.5.9 protein.degradation.AAA type

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G28580.1 11 Arabidopsis thaliana 0 461 77 86 0 (0) S
AT3G28580.2 11 Arabidopsis thaliana 0 460 72 81 0 (0) S
AT3G28510.1 11 Arabidopsis thaliana 0 471 58 75 0 (0) _
Os12g24320.1 7 Oryza sativa 0 522 53 69 0 (0) S
Os12g44190.1 7 Oryza sativa 6E-180 468 54 72 0 (0) S
Os07g09490.1 7 Oryza sativa 1E-159 456 51 66 0 (0) M
GRMZM5G893912_P01 3.21 Zea mays 0 468 55 72 0 (0) S
Zm00001eb033130_P001 agpv5 Zea mays 0 468 55 72 0 (0) S
v1_GRMZM2G108061_P01 4a53 Zea mays 0 468 55 72 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(2) AAA_11(2) AAA_16(1) AAA_18(1) AAA_19(1) AAA_22(1) AAA_23(2) AAA_29(1) AAA
TargetP:	Cytoplasm (Class 5 C0.016; M0.241; S0.482; _0.570)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	514 aa (-cTP 511)
Molecular Weight	60.35 kDA(-cTP )
PI	6.28(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data