PPDB

 The Plant Proteome Database

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AT5G39950.1   thioredoxin 2
Lab Annot. thioredoxin H-type 2 (TRX-H-2) (Gif2) - dual location mitos&cytosol
Mapman: 21.1 redox.thioredoxin
Curated Location cytosol (Pubmed: 20133584 )
mitochondria (Pubmed: 20133584 )

TAIR curated location: cytosol7777559
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G59730.1 11Arabidopsis thaliana2E-3313241640 (0)_
AT1G69880.1 11Arabidopsis thaliana1E-3210444740 (0)_
AT1G19730.1 11Arabidopsis thaliana3E-32110477028 (6)_
Os03g58630.1 7Oryza sativa7E-40130526715 (15)_
Os07g09310.1 7Oryza sativa8E-4012951680 (0)_
Os07g08840.1 7Oryza sativa5E-29109416632 (32)_
Zm00001eb212760_P001 agpv5Zea mays9E-389461780 (0)_
GRMZM2G009928_P03 3.21Zea mays9E-3894617835 (35)_
v1_GRMZM2G009928_P03 4a53Zea mays9E-3894617828 (28)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AhpC-TSA(1) DUF953(1) Glutaredoxin(1) KaiB(1) OST3_OST6(1) Redoxin(2) SseB_C(1)
TargetP: Cytoplasm (Class 5 C0.462; M0.067; S0.107; _0.524)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 133 aa (-cTP 102)
Molecular Weight 14.68 kDA(-cTP )
PI 5.74(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help