PPDB

PPDB	The Plant Proteome Database

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AT5G39860.1 basic helix-loop-helix (bHLH) DNA-binding family protein

Lab Annot.

basic helix-loop-helix (bHLH) DNA-binding protein
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G28857.1 11 Arabidopsis thaliana 3E-51 92 86 94 0 (0) M
AT5G15160.1 11 Arabidopsis thaliana 6E-33 75 72 89 0 (0) C
AT1G26945.1 11 Arabidopsis thaliana 8E-31 75 72 90 0 (0) C
Os10g26460.1 7 Oryza sativa 2E-23 78 56 80 0 (0) C
Os04g54900.1 7 Oryza sativa 5E-23 76 57 80 0 (0) C
Os10g26410.1 7 Oryza sativa 2E-22 92 47 79 0 (0) C
GRMZM2G042101_P01 3.21 Zea mays 5E-25 86 54 80 0 (0) C
v1_GRMZM2G042101_P01 4a53 Zea mays 5E-25 86 54 80 0 (0) C
Zm00001eb372510_P001 agpv5 Zea mays 9E-23 91 49 78 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF948(1) FlxA(1) HLH(2) Nucleopor_Nup85(1) Syntaxin_2(1) TipAS(2)
TargetP:	Chloroplast (Class 4 C0.648; M0.434; S0.011; _0.066)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	92 aa (-cTP 85)
Molecular Weight	10.51 kDA(-cTP 9.63)
PI	9.09(-cTP 5.39)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data