PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G39810.1   AGAMOUS-like 98

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39750.1 11Arabidopsis thaliana035587900 (0)C
AT5G38740.1 11Arabidopsis thaliana3E-12331266720 (0)C
AT5G40220.1 11Arabidopsis thaliana2E-10530060690 (0)C
Os01g68420.1 7Oryza sativa5E-076847540 (0)_
Os01g18440.1 7Oryza sativa2E-069131510 (0)_
Os03g38610.1 7Oryza sativa3E-068134560 (0)_
Zm00001eb243490_P001 agpv5Zea mays6E-0910231540 (0)M
GRMZM5G839969_P01 3.21Zea mays6E-0910231540 (0)M
v1_GRMZM2G411477_P01 4a53Zea mays7E-0910231540 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DMPK_coil(2) SRF-TF(1)
TargetP: Chloroplast (Class 3 C0.687; M0.196; S0.094; _0.106)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 329 aa (-cTP 284)
Molecular Weight 37.29 kDA(-cTP 32.59)
PI 5.71(-cTP 5.43)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help