PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G39790.1   PROTEIN TARGETING TO STARCH (PTST)
Lab Annot. PROTEIN TARGETING TO STARCH 1 (PTST1)
Mapman: 2.1.2 major CHO metabolism.synthesis.starch
Curated Location plastid (Pubmed: 23198870 19038037 25710501 29866647 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39790.3 11Arabidopsis thaliana028097970 (0)M
AT5G39790.2 11Arabidopsis thaliana7E-12117399990 (0)M
AT1G27070.1 11Arabidopsis thaliana2E-1210733570 (0)C
Os02g04330.2 7Oryza sativa3E-8819666820 (0)_
Os02g04330.1 7Oryza sativa3E-8819666820 (0)_
Os03g48170.1 7Oryza sativa9E-1116331470 (0)C
Zm00001eb231700_P002 agpv5Zea mays9E-9121362800 (0)C
v1_GRMZM2G042245_P01 4a53Zea mays9E-9121362806 (6)C
GRMZM2G042245_P01 3.21Zea mays9E-9121362805 (5)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AMPK1_CBM(1) CBM53(1)
TargetP: Mitochondria (Class 5 C0.183; M0.355; S0.022; _0.106)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 273 aa (-cTP 229)
Molecular Weight 31.05 kDA(-cTP )
PI 6.56(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help