PPDB

PPDB	The Plant Proteome Database

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AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G55840.3 11 Arabidopsis thaliana 1E-107 631 32 52 0 (0) _
AT5G55840.1 11 Arabidopsis thaliana 3E-107 631 32 52 0 (0) M
AT5G55840.2 11 Arabidopsis thaliana 3E-107 631 32 52 0 (0) M
Os06g05920.1 7 Oryza sativa 0 589 48 71 0 (0) C
Os03g06910.1 7 Oryza sativa 4E-101 556 32 55 0 (0) M
Os03g10420.1 7 Oryza sativa 4E-93 599 31 50 0 (0) _
Zm00001eb376700_P001 agpv5 Zea mays 0 549 48 72 0 (0) _
Zm00001eb376700_P003 agpv5 Zea mays 0 503 48 72 0 (0) _
Zm00001eb376700_P002 agpv5 Zea mays 0 503 48 72 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AEP1(3) ATP13(7) BTAD(2) Clathrin(3) DEP(2) DIM(2) ECSIT(5) MRP-S27(5) Mtf2(3) P
TargetP:	Mitochondria (Class 4 C0.058; M0.517; S0.088; _0.206)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	747 aa (-cTP 690)
Molecular Weight	84.27 kDA(-cTP )
PI	7.05(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21533090(plasmodesmata-crude)

Comparative Proteomics Data