PPDB

PPDB	The Plant Proteome Database

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AT5G39670.1 Calcium-binding EF-hand family protein

Lab Annot.

Mapman: 30.3 signalling.calcium

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29000.1 11 Arabidopsis thaliana 2E-63 185 61 73 0 (0) S
AT3G47480.1 11 Arabidopsis thaliana 1E-16 69 50 78 0 (0) S
AT4G03290.1 11 Arabidopsis thaliana 9E-13 64 50 68 0 (0) _
Os11g38780.1 7 Oryza sativa 3E-26 118 44 64 0 (0) S
Os11g04770.1 7 Oryza sativa 1E-18 110 41 59 0 (0) C
Os09g24580.1 7 Oryza sativa 4E-17 72 50 62 0 (0) C
Zm00001eb167410_P001 agpv5 Zea mays 7E-28 116 44 64 0 (0) C
v1_GRMZM2G157241_P01 4a53 Zea mays 7E-28 116 44 64 1 (1) C
GRMZM2G157241_P01 3.21 Zea mays 7E-28 116 44 64 1 (1) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dockerin_1(2) EF-hand_1(2) EF-hand_5(2) EF-hand_6(3) EF-hand_7(2) EF-hand_8(2) S
TargetP:	Cytoplasm (Class 5 C0.210; M0.082; S0.182; _0.306)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	204 aa (-cTP 147)
Molecular Weight	23.83 kDA(-cTP )
PI	4.93(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data