PPDB

The Plant Proteome Database

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AT5G39670.1   Calcium-binding EF-hand family protein

Lab Annot.
Mapman: 30.3 signalling.calcium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G29000.1 11Arabidopsis thaliana2E-6318561730 (0)S
AT3G47480.1 11Arabidopsis thaliana1E-166950780 (0)S
AT4G03290.1 11Arabidopsis thaliana9E-136450680 (0)_
Os11g38780.1 7Oryza sativa3E-2611844640 (0)S
Os11g04770.1 7Oryza sativa1E-1811041590 (0)C
Os09g24580.1 7Oryza sativa4E-177250620 (0)C
Zm00001eb167410_P001 agpv5Zea mays7E-2811644640 (0)C
v1_GRMZM2G157241_P01 4a53Zea mays7E-2811644641 (1)C
GRMZM2G157241_P01 3.21Zea mays7E-2811644641 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dockerin_1(2) EF-hand_1(2) EF-hand_5(2) EF-hand_6(3) EF-hand_7(2) EF-hand_8(2) S
TargetP: Cytoplasm (Class 5 C0.210; M0.082; S0.182; _0.306)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 204 aa (-cTP 147)
Molecular Weight 23.83 kDA(-cTP )
PI 4.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


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