PPDB

The Plant Proteome Database

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AT5G39660.1   cycling DOF factor 2

Lab Annot. DNA binding / transcription factor (CDF2)
Mapman: 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39660.2 11Arabidopsis thaliana04571001001 (1)_
AT5G39660.3 11Arabidopsis thaliana04571001000 (0)_
AT3G47500.1 11Arabidopsis thaliana3E-8049839500 (0)_
Os07g48570.1 7Oryza sativa1E-7947538520 (0)_
Os01g15900.1 7Oryza sativa2E-6856835450 (0)_
Os03g07360.1 7Oryza sativa1E-6649835470 (0)_
Zm00001eb128930_P002 agpv5Zea mays7E-6554733450 (0)_
v1_GRMZM2G162749_P01 4a53Zea mays1E-5949834460 (0)_
Zm00001eb005380_P001 agpv5Zea mays1E-5949834460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Nop14(1) PHD(1) zf-Dof(1)
TargetP: Cytoplasm (Class 3 C0.103; M0.102; S0.261; _0.704)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 457 aa (-cTP 436)
Molecular Weight 49.81 kDA(-cTP )
PI 5.19(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
870Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help