PPDB

The Plant Proteome Database

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AT5G39650.1   transmembrane protein%2C putative (DUF679)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G09157.1 11Arabidopsis thaliana1E-14424390950 (0)C
AT3G02430.1 11Arabidopsis thaliana2E-4319038570 (0)C
AT4G24310.1 11Arabidopsis thaliana1E-4118838600 (0)C
Os05g48840.1 7Oryza sativa4E-3818639550 (0)C
Os07g22510.1 7Oryza sativa3E-3718140530 (0)_
Os08g01530.1 7Oryza sativa6E-3718139590 (0)M
v1_GRMZM2G465053_P01 4a53Zea mays4E-7319062740 (0)_
Zm00001eb372320_P001 agpv5Zea mays4E-7319062740 (0)_
GRMZM2G465053_P01 3.21Zea mays4E-7319062740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CbiN(2) DUF679(1)
TargetP: Chloroplast (Class 3 C0.857; M0.021; S0.007; _0.439)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 244 aa (-cTP 186)
Molecular Weight 26.54 kDA(-cTP 20.50)
PI 8.73(-cTP 5.55)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help