PPDB

PPDB	The Plant Proteome Database

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AT5G39630.1 Vesicle transport v-SNARE family protein

Lab Annot.

Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29100.3 11 Arabidopsis thaliana 4E-59 221 48 63 0 (0) _
AT5G39510.1 11 Arabidopsis thaliana 2E-57 186 53 69 42 (42) _
AT1G26670.1 11 Arabidopsis thaliana 2E-44 210 40 65 7 (7) _
Os01g51120.1 7 Oryza sativa 5E-48 189 46 69 21 (21) _
Os01g37980.1 7 Oryza sativa 7E-44 189 41 68 2 (2) _
Os01g51120.2 7 Oryza sativa 9E-27 111 49 70 14 (14) _
GRMZM5G894156_P04 3.21 Zea mays 7E-50 220 43 64 25 (25) _
GRMZM5G894156_P03 3.21 Zea mays 7E-50 220 43 64 25 (25) _
GRMZM5G894156_P02 3.21 Zea mays 7E-50 220 43 64 25 (25) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	BORCS8(2) Cauli_AT(3) DivIC(2) DUF2205(3) DUF2968(2) DUF668(2) Exonuc_VII_L(1) F
TargetP:	Cytoplasm (Class 2 C0.078; M0.094; S0.043; _0.846)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	207 aa (-cTP 185)
Molecular Weight	23.93 kDA(-cTP )
PI	9.13(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data