PPDB

The Plant Proteome Database

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AT5G39590.1   TLD-domain containing nucleolar protein

Lab Annot. unknown protein TLD domain
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g56790.1 7Oryza sativa3E-15455544610 (0)C
Zm00001eb067290_P001 agpv5Zea mays4E-15856745600 (0)C
GRMZM2G047474_P01 3.21Zea mays4E-158567456041 (0)C
v1_GRMZM2G047474_P01 4a53Zea mays4E-15856745600 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TLD(1)
TargetP: Cytoplasm (Class 5 C0.641; M0.041; S0.038; _0.698)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 542 aa (-cTP 477)
Molecular Weight 59.91 kDA(-cTP )
PI 5.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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