PPDB

PPDB	The Plant Proteome Database

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AT5G39560.1 Galactose oxidase/kelch repeat superfamily protein

Lab Annot.

kelch repeat-containing F-box protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G39756.1 11 Arabidopsis thaliana 2E-79 390 41 55 3 (2) _
AT4G19870.1 11 Arabidopsis thaliana 6E-78 390 40 56 0 (0) C
AT4G19870.2 11 Arabidopsis thaliana 6E-78 390 40 56 0 (0) C
Os02g30210.2 7 Oryza sativa 6E-11 305 24 39 0 (0) M
Os02g30210.1 7 Oryza sativa 6E-11 305 24 39 0 (0) M
Os04g31120.5 7 Oryza sativa 8E-10 331 22 38 0 (0) M
GRMZM2G035243_P01 3.21 Zea mays 1E-11 235 25 45 0 (0) _
GRMZM2G035243_P03 3.21 Zea mays 1E-11 235 25 45 0 (0) _
v1_GRMZM2G035243_P02 4a53 Zea mays 1E-11 235 25 45 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1668(1) F-box(1) F-box-like(1) F-box_4(2) Kelch_1(4) Kelch_2(4) Kelch_3(2) Ke
TargetP:	Cytoplasm (Class 5 C0.577; M0.047; S0.015; _0.673)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	403 aa (-cTP 397)
Molecular Weight	46.45 kDA(-cTP )
PI	6.56(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
180_181	Detail								leaf [A. thaliana]	chloroplast stroma	clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data