PPDB

The Plant Proteome Database

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AT5G39540.1   F-box associated ubiquitination effector family protein

Lab Annot.
Mapman: 27.3.27 RNA.regulation of transcription.NAC domain transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G55210.1 11Arabidopsis thaliana4E-4710785870 (0)_
AT1G50870.1 11Arabidopsis thaliana2E-427989920 (0)_
AT1G47790.1 11Arabidopsis thaliana1E-157455670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF865(1) FBA_3(1) FIIND(1)
TargetP: Cytoplasm (Class 3 C0.084; M0.219; S0.104; _0.678)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 196 aa (-cTP 187)
Molecular Weight 22.42 kDA(-cTP )
PI 5.97(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help