PPDB

The Plant Proteome Database

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AT5G39520.1   hypothetical protein (DUF1997)

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39530.1 11Arabidopsis thaliana4E-11823472820 (0)M
AT5G39530.2 11Arabidopsis thaliana1E-10220672810 (0)M
Os03g07200.3 7Oryza sativa1E-5120440620 (0)C
Os03g07200.2 7Oryza sativa2E-5120440620 (0)C
Os03g07200.1 7Oryza sativa2E-4423735540 (0)C
GRMZM2G150758_P01 3.21Zea mays3E-5519745633 (3)C
Zm00001eb328430_P003 agpv5Zea mays3E-5519745630 (0)C
v1_GRMZM2G150758_P01 4a53Zea mays3E-5519745631 (1)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1997(1) EnY2(2) EutH(1)
TargetP: Chloroplast (Class 3 C0.743; M0.053; S0.191; _0.282)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 230 aa (-cTP 195)
Molecular Weight 26.44 kDA(-cTP 22.65)
PI 9.48(-cTP 9.15)

Experimental Evidence

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View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
94Detail       root [B. rapa] plastid stroma 

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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