PPDB

PPDB	The Plant Proteome Database

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AT5G39500.1 GNOM-like 1

Lab Annot.

pattern formation protein, putative
Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39500.2 11 Arabidopsis thaliana 0 1443 100 100 0 (0) _
AT1G13980.2 11 Arabidopsis thaliana 0 1426 62 76 5 (3) _
AT1G13980.1 11 Arabidopsis thaliana 0 1426 62 76 5 (3) _
Os02g22090.1 7 Oryza sativa 0 1443 54 70 13 (13) M
Os03g46330.1 7 Oryza sativa 0 1169 60 75 14 (14) _
Os04g02690.1 7 Oryza sativa 4E-104 414 46 64 0 (0) _
GRMZM2G082916_P01 3.21 Zea mays 0 1424 54 71 3 (3) M
v1_GRMZM2G082916_P01 4a53 Zea mays 0 1424 54 71 2 (2) M
Zm00001eb217800_P002 agpv5 Zea mays 0 1211 57 74 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1981(2) DUF742(2) Hph(1) Mon2_C(1) Sec7(1) Sec7_N(2)
TargetP:	Cytoplasm (Class 5 C0.513; M0.190; S0.014; _0.518)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1443 aa (-cTP 1414)
Molecular Weight	161.95 kDA(-cTP )
PI	5.38(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2250	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data