PPDB

PPDB	The Plant Proteome Database

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AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G18750.1 11 Arabidopsis thaliana 4E-148 653 37 57 0 (0) C
AT1G11290.1 11 Arabidopsis thaliana 2E-134 632 35 55 1 (1) C
AT1G15510.1 11 Arabidopsis thaliana 8E-131 609 37 57 0 (0) C
Os02g44480.1 7 Oryza sativa 3E-176 558 46 64 0 (0) M
Os04g14130.3 7 Oryza sativa 3E-130 673 35 53 0 (0) _
Os04g14130.2 7 Oryza sativa 3E-130 673 35 53 0 (0) _
Zm00001eb249870_P001 agpv5 Zea mays 4E-169 644 42 59 0 (0) M
v1_GRMZM2G014977_P01 4a53 Zea mays 4E-169 644 42 59 0 (0) M
GRMZM2G014977_P01 3.21 Zea mays 4E-169 644 42 59 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) ChAPs(3) PPR(13) PPR_1(13) PPR_2(11) PPR_3(11) PPR_long(3) RPN7(2) TPR_
TargetP:	Mitochondria (Class 2 C0.038; M0.865; S0.012; _0.130)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	677 aa (-cTP 634)
Molecular Weight	75.96 kDA(-cTP )
PI	8.19(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data