PPDB

 The Plant Proteome Database

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AT5G39290.1   expansin-A25 protein
Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39270.1 11Arabidopsis thaliana027997980 (0)S
AT5G39300.1 11Arabidopsis thaliana1E-16427977870 (0)S
AT5G39280.1 11Arabidopsis thaliana1E-16128177850 (0)S
Os03g60720.1 7Oryza sativa2E-9122558694 (4)S
Os01g60770.1 7Oryza sativa5E-8822155680 (0)S
Os05g39990.1 7Oryza sativa1E-8722055690 (0)M
v1_GRMZM2G368886_P01 4a53Zea mays8E-9122556690 (0)S
GRMZM2G368886_P01 3.21Zea mays8E-9122556690 (0)S
v1_GRMZM2G445169_P01 4a53Zea mays3E-9024654670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DPBB_1(1) Expansin_C(1)
TargetP: Secreted (Class 1 C0.003; M0.030; S0.996; _0.073)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 279 aa (-cTP 262)
Molecular Weight 30.98 kDA(-cTP )
PI 8.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2148Detail       Total leaf [A. thaliana] total soluble stromawt & cgep

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help