PPDB

The Plant Proteome Database

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AT5G39270.1   expansin A22

Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39290.1 11Arabidopsis thaliana027997981 (1)S
AT5G39300.1 11Arabidopsis thaliana5E-16527977870 (0)S
AT5G39280.1 11Arabidopsis thaliana3E-16228177860 (0)S
Os03g60720.1 7Oryza sativa7E-9222559694 (4)S
Os01g60770.1 7Oryza sativa6E-8922156680 (0)S
Os05g39990.1 7Oryza sativa1E-8822056690 (0)M
v1_GRMZM2G368886_P01 4a53Zea mays2E-9022556680 (0)S
GRMZM2G368886_P01 3.21Zea mays2E-9022556680 (0)S
v1_GRMZM2G445169_P01 4a53Zea mays2E-8924654660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) Expansin_C(1)
TargetP: Secreted (Class 1 C0.002; M0.030; S0.997; _0.068)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 279 aa (-cTP 217)
Molecular Weight 30.96 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18796151(cell wall (hypocotyl))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help