PPDB

 The Plant Proteome Database

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AT5G39260.1   expansin A21
Lab Annot.
Mapman: 10.7 cell wall.modification
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39300.1 11Arabidopsis thaliana1E-13327767760 (0)S
AT5G39280.1 11Arabidopsis thaliana1E-12927666750 (0)S
AT5G39270.1 11Arabidopsis thaliana1E-12628065740 (0)S
Os05g39990.1 7Oryza sativa7E-7423650610 (0)M
Os01g60770.1 7Oryza sativa3E-7322250640 (0)S
Os01g16770.1 7Oryza sativa8E-7321651650 (0)_
v1_GRMZM2G339122_P01 4a53Zea mays5E-7622252640 (0)S
GRMZM2G339122_P01 3.21Zea mays5E-7622252640 (0)S
Zm00001eb149460_P001 agpv5Zea mays5E-7622252640 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DPBB_1(1) Expansin_C(1)
TargetP: Secreted (Class 1 C0.002; M0.069; S0.986; _0.074)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 262 aa (-cTP 229)
Molecular Weight 28.13 kDA(-cTP )
PI 8.51(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to siliques)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help