PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G39230.1 TFIIB zinc-binding protein

Lab Annot.

Mapman: 27.2 RNA.transcription

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT3G29380.1 11 Arabidopsis thaliana 4E-10 88 43 60 1 (1) _
AT2G41630.1 11 Arabidopsis thaliana 2E-08 64 40 64 6 (1) _
AT4G10680.1 11 Arabidopsis thaliana 5E-08 52 40 75 0 (0) _
Os09g36440.1 7 Oryza sativa 3E-07 33 54 78 0 (0) _
Os05g47480.1 7 Oryza sativa 1E-06 33 57 78 0 (0) _
GRMZM2G159715_P01 3.21 Zea mays 2E-08 33 54 81 0 (0) _
v1_GRMZM2G159715_P01 4a53 Zea mays 7E-08 33 54 81 0 (0) _
GRMZM2G002828_P02 3.21 Zea mays 3E-07 33 54 78 16 (16) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ArfGap(1) TF_Zn_Ribbon(2) zf-LITAF-like(1) zinc_ribbon_6(2)
TargetP:	Cytoplasm (Class 1 C0.099; M0.041; S0.041; _0.918)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	119 aa (-cTP 65)
Molecular Weight	13.55 kDA(-cTP )
PI	6.93(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data