PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G39190.1   germin-like protein 2

Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified; 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39160.1 11Arabidopsis thaliana1E-160222991001 (1)S
AT5G39130.1 11Arabidopsis thaliana7E-159222971001 (1)S
AT5G39160.3 11Arabidopsis thaliana9E-15522297970 (0)S
Os02g29000.1 7Oryza sativa3E-8421060750 (0)S
Os02g29020.1 7Oryza sativa1E-8319863760 (0)S
Os04g52720.1 7Oryza sativa2E-8220763730 (0)S
Zm00001eb171510_P001 agpv5Zea mays1E-8522362720 (0)S
v1_GRMZM2G149714_P01 4a53Zea mays1E-8522362725 (5)S
GRMZM2G149714_P01 3.21Zea mays1E-8522362723 (3)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AraC_binding(1) Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP: Secreted (Class 1 C0.007; M0.019; S0.984; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 140)
Molecular Weight 23.93 kDA(-cTP )
PI 6.49(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help