PPDB

PPDB	The Plant Proteome Database

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AT5G39130.1 RmlC-like cupins superfamily protein

Lab Annot.

RmlC-like cupins protein
Mapman: 20.2.99 stress.abiotic.unspecified

Curated Location

TAIR curated location: extracellular matrix10987552

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39190.1 11 Arabidopsis thaliana 7E-159 222 97 100 1 (1) S
AT5G39160.1 11 Arabidopsis thaliana 2E-158 222 96 100 1 (1) S
AT5G39160.3 11 Arabidopsis thaliana 1E-152 222 94 97 0 (0) S
Os02g29000.1 7 Oryza sativa 1E-84 210 60 75 0 (0) S
Os02g29020.1 7 Oryza sativa 3E-84 200 63 76 0 (0) S
Os04g52720.1 7 Oryza sativa 2E-82 207 62 74 0 (0) S
Zm00001eb171510_P001 agpv5 Zea mays 1E-85 223 61 72 0 (0) S
v1_GRMZM2G149714_P01 4a53 Zea mays 1E-85 223 61 72 5 (5) S
GRMZM2G149714_P01 3.21 Zea mays 1E-85 223 61 72 3 (3) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AraC_binding(1) Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP:	Secreted (Class 1 C0.008; M0.014; S0.987; _0.044)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	222 aa (-cTP 140)
Molecular Weight	24.01 kDA(-cTP )
PI	5.90(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data