PPDB

PPDB	The Plant Proteome Database

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AT5G39120.1 RmlC-like cupins superfamily protein

Lab Annot.

Mapman: 20.2.99 stress.abiotic.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39150.1 11 Arabidopsis thaliana 2E-158 221 98 99 1 (1) S
AT5G39180.1 11 Arabidopsis thaliana 2E-157 221 98 98 0 (0) S
AT5G39110.1 11 Arabidopsis thaliana 2E-147 222 93 95 0 (0) S
Os02g29000.1 7 Oryza sativa 1E-82 206 62 74 0 (0) S
Os02g29020.1 7 Oryza sativa 3E-82 199 64 74 0 (0) S
Os08g08960.1 7 Oryza sativa 1E-80 203 64 75 0 (0) S
Zm00001eb171510_P001 agpv5 Zea mays 2E-86 224 62 72 0 (0) S
v1_GRMZM2G149714_P01 4a53 Zea mays 2E-86 224 62 72 5 (5) S
GRMZM2G149714_P01 3.21 Zea mays 2E-86 224 62 72 3 (3) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AraC_binding(1) Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP:	Secreted (Class 1 C0.012; M0.015; S0.975; _0.085)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	221 aa (-cTP 151)
Molecular Weight	23.87 kDA(-cTP )
PI	6.27(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

20405473(roots - TRX-y interacting proteins)
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data