PPDB

PPDB	The Plant Proteome Database

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AT5G39110.1 RmlC-like cupins superfamily protein

Lab Annot.

Mapman: 20.2.99 stress.abiotic.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39100.1 11 Arabidopsis thaliana 3E-153 222 94 97 0 (0) S
AT5G39150.1 11 Arabidopsis thaliana 2E-148 222 94 95 1 (1) S
AT5G39180.1 11 Arabidopsis thaliana 1E-147 222 93 95 0 (0) S
Os02g29000.1 7 Oryza sativa 2E-86 217 61 73 0 (0) S
Os02g29020.1 7 Oryza sativa 9E-84 199 64 75 0 (0) S
Os08g08960.1 7 Oryza sativa 2E-82 203 65 76 0 (0) S
v1_GRMZM2G170829_P01 4a53 Zea mays 4E-87 224 62 73 0 (0) S
Zm00001eb171650_P001 agpv5 Zea mays 4E-87 224 62 73 0 (0) S
GRMZM2G170829_P01 3.21 Zea mays 4E-87 224 62 73 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AraC_binding(1) Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP:	Secreted (Class 1 C0.014; M0.018; S0.978; _0.069)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	222 aa (-cTP 139)
Molecular Weight	23.91 kDA(-cTP )
PI	6.27(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data