PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G39100.1   germin-like protein 6
Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39110.1 11Arabidopsis thaliana3E-15322294970 (0)S
AT5G39150.1 11Arabidopsis thaliana4E-14822292961 (1)S
AT5G39180.1 11Arabidopsis thaliana4E-14722291950 (0)S
Os02g29000.1 7Oryza sativa1E-8421761730 (0)S
Os02g29020.1 7Oryza sativa5E-8219962750 (0)S
Os08g08960.1 7Oryza sativa2E-8020364750 (0)S
v1_GRMZM2G170829_P01 4a53Zea mays5E-8522461720 (0)S
Zm00001eb171650_P001 agpv5Zea mays5E-8522461720 (0)S
GRMZM2G170829_P01 3.21Zea mays5E-8522461720 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cupin_1(1) Cupin_2(1) Cupin_7(2)
TargetP: Secreted (Class 1 C0.008; M0.019; S0.973; _0.078)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 123)
Molecular Weight 24.04 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help