PPDB

The Plant Proteome Database

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AT5G39050.1   HXXXD-type acyl-transferase family protein

Lab Annot.
Mapman: 16.8.1.21 secondary metabolism.flavonoids.anthocyanins.anthocyanin 5-aromatic acyltransferase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39080.1 11Arabidopsis thaliana0460738324 (0)_
AT5G39090.1 11Arabidopsis thaliana046468780 (0)C
AT3G29635.1 11Arabidopsis thaliana3E-15046550660 (0)C
Os04g51660.1 7Oryza sativa4E-5846731465 (5)M
Os02g28300.1 7Oryza sativa2E-5646932490 (0)M
Os02g57480.1 7Oryza sativa5E-5647431488 (8)_
Zm00001eb192480_P001 agpv5Zea mays1E-5547630480 (0)_
v1_GRMZM2G316787_P01 4a53Zea mays1E-5547630480 (0)_
GRMZM2G316787_P01 3.21Zea mays1E-5547630480 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Transferase(1) UNC80(1)
TargetP: Cytoplasm (Class 2 C0.173; M0.044; S0.053; _0.874)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 469 aa (-cTP 466)
Molecular Weight 51.76 kDA(-cTP )
PI 5.36(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help