PPDB

PPDB	The Plant Proteome Database

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AT5G39040.1 transporter associated with antigen processing protein 2

Lab Annot.

ATTAP2 ATPase
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G39040.2 11 Arabidopsis thaliana 0 509 100 100 0 (0) _
AT1G02520.3 11 Arabidopsis thaliana 2E-119 595 37 60 0 (0) _
AT1G02520.2 11 Arabidopsis thaliana 2E-119 595 37 60 0 (0) _
Os03g54790.1 7 Oryza sativa 0 616 76 87 5 (5) M
Os01g50160.1 7 Oryza sativa 3E-116 592 37 59 0 (0) _
Os05g47500.1 7 Oryza sativa 4E-114 606 35 59 0 (0) _
Zm00001eb214670_P002 agpv5 Zea mays 0 616 76 87 0 (0) _
Zm00001eb214670_P003 agpv5 Zea mays 0 616 76 87 0 (0) _
v1_GRMZM2G072071_P01 4a53 Zea mays 0 616 76 87 6 (6) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_24(1) ABC_membrane(1) ABC_tran(1) DUF53
TargetP:	Cytoplasm (Class 4 C0.085; M0.306; S0.013; _0.703)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	5 TMs
TAT position:
Length	644 aa (-cTP 610)
Molecular Weight	69.10 kDA(-cTP )
PI	8.13(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

15215502(Vacuolar proteome)
15539469(vacuole)
16618929(vacuole-LOPIT-callus)
17151019(vacuole - suspension cell)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19114538(guard cells Arabidopsis leaf)
21988472(vacuole (unfiltered data))
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data