PPDB

 The Plant Proteome Database

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AT5G38910.1   RmlC-like cupins superfamily protein
Lab Annot.
Mapman: 20.2.99 stress.abiotic.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38910.2 11Arabidopsis thaliana1E-12522283830 (0)S
AT5G38940.1 11Arabidopsis thaliana5E-115221768532 (24)S
AT5G38940.2 11Arabidopsis thaliana1E-11422176850 (0)_
Os02g29000.1 7Oryza sativa1E-8521559720 (0)S
Os02g29020.1 7Oryza sativa3E-8119862720 (0)S
Os08g08960.1 7Oryza sativa2E-7522060700 (0)S
Zm00001eb202970_P001 agpv5Zea mays3E-7721460710 (0)S
v1_GRMZM2G075925_P01 4a53Zea mays3E-7721460710 (0)S
GRMZM2G075925_P01 3.21Zea mays3E-7721460710 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Cupin_1(1) Cupin_2(1)
TargetP: Secreted (Class 1 C0.035; M0.008; S0.986; _0.028)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 222 aa (-cTP 142)
Molecular Weight 23.88 kDA(-cTP )
PI 6.40(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help