PPDB

PPDB	The Plant Proteome Database

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AT5G38895.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G38895.2 11 Arabidopsis thaliana 7E-166 221 100 100 0 (0) M
AT5G38895.3 11 Arabidopsis thaliana 9E-166 221 100 100 0 (0) _
AT5G15790.1 11 Arabidopsis thaliana 5E-80 230 52 67 0 (0) C
Os01g70160.1 7 Oryza sativa 3E-51 229 42 52 0 (0) _
Os11g41140.1 7 Oryza sativa 9E-51 233 41 53 0 (0) _
Os03g40170.1 7 Oryza sativa 4E-25 155 40 52 0 (0) _
v1_GRMZM2G468260_P01 4a53 Zea mays 8E-54 226 42 55 0 (0) _
Zm00001eb166460_P001 agpv5 Zea mays 8E-54 226 42 55 0 (0) _
GRMZM2G468260_P01 3.21 Zea mays 8E-54 226 42 55 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) zf-ANAPC11(1) zf-C3H2C3(2) zf-C3HC4(1) zf-C3HC4_2(2) zf-C3HC4_3(1) zf
TargetP:	Secreted (Class 5 C0.200; M0.030; S0.426; _0.274)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	221 aa (-cTP 163)
Molecular Weight	24.52 kDA(-cTP )
PI	4.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data