PPDB

PPDB	The Plant Proteome Database

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AT5G38840.1 SMAD/FHA domain-containing protein

Lab Annot.

forkhead-associated domain-containing protein / FHA domain-containing protein
Mapman: 31.4 cell.vesicle transport

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G47790.1 11 Arabidopsis thaliana 2E-18 129 35 62 0 (0) M
AT3G20550.1 11 Arabidopsis thaliana 1E-14 116 35 57 22 (21) C
AT1G34355.3 11 Arabidopsis thaliana 2E-10 114 35 47 0 (0) _
Os06g16430.1 7 Oryza sativa 0 668 53 70 4 (4) C
Os08g23680.1 7 Oryza sativa 3E-19 123 40 60 0 (0) M
Os08g23680.3 7 Oryza sativa 3E-19 123 40 60 0 (0) M
Zm00001eb380550_P003 agpv5 Zea mays 0 653 52 71 0 (0) C
Zm00001eb380550_P002 agpv5 Zea mays 0 653 52 71 0 (0) C
Zm00001eb380550_P001 agpv5 Zea mays 0 654 52 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1676(1) FHA(1) RNAse_A_bac(3) Yop-YscD_cpl(1)
TargetP:	Chloroplast (Class 4 C0.779; M0.033; S0.062; _0.503)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	735 aa (-cTP 731)
Molecular Weight	82.12 kDA(-cTP 81.70)
PI	5.03(-cTP 5.03)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data