PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G38740.1   AGAMOUS-like 77

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G39750.1 11Arabidopsis thaliana5E-14631772770 (0)C
AT5G41200.1 11Arabidopsis thaliana8E-12833467730 (0)C
AT5G39810.1 11Arabidopsis thaliana1E-12434068730 (0)C
Os03g38610.1 7Oryza sativa7E-097837610 (0)_
Os01g18440.1 7Oryza sativa1E-067338540 (0)_
Os01g18420.1 7Oryza sativa2E-0616127440 (0)_
v1_GRMZM2G411477_P01 4a53Zea mays2E-1117930500 (0)M
Zm00001eb243490_P001 agpv5Zea mays2E-1117930500 (0)M
GRMZM5G839969_P01 3.21Zea mays2E-1117930500 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SPASM(2) SRF-TF(1)
TargetP: Chloroplast (Class 5 C0.499; M0.374; S0.063; _0.089)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 426 aa (-cTP 380)
Molecular Weight 48.44 kDA(-cTP 43.56)
PI 8.19(-cTP 7.31)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help