PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G38730.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G09680.1 11 Arabidopsis thaliana 1E-68 468 29 52 0 (0) M
AT1G05670.3 11 Arabidopsis thaliana 4E-68 512 30 49 0 (0) M
AT1G05670.2 11 Arabidopsis thaliana 4E-68 512 30 49 0 (0) M
Os02g58139.1 7 Oryza sativa 1E-157 584 41 61 0 (0) _
Os02g58139.2 7 Oryza sativa 1E-157 584 41 61 0 (0) _
Os05g19390.1 7 Oryza sativa 8E-67 488 27 52 0 (0) M
v1_GRMZM2G145128_P01 4a53 Zea mays 1E-174 585 43 64 0 (0) _
Zm00001eb259350_P002 agpv5 Zea mays 1E-174 585 43 64 0 (0) _
Zm00001eb259350_P001 agpv5 Zea mays 1E-174 585 43 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Clathrin(4) DED(2) ECSIT(3) Exog_C(2) MRP-S27(3) Mtf2(4) PIN(2) PPR(12) PPR_1(11
TargetP:	Cytoplasm (Class 4 C0.113; M0.059; S0.172; _0.497)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	596 aa (-cTP 521)
Molecular Weight	67.89 kDA(-cTP )
PI	8.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data