PPDB

PPDB	The Plant Proteome Database

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AT5G38640.1 NagB/RpiA/CoA transferase-like superfamily protein

Lab Annot.

NagB/RpiA/CoA transferase-like protein
Mapman: 29.2.3 protein.synthesis.initiation

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G48970.1 11 Arabidopsis thaliana 0 686 53 68 0 (0) M
AT2G44070.1 11 Arabidopsis thaliana 0 326 91 95 1 (1) S
AT1G48970.2 11 Arabidopsis thaliana 0 615 53 66 0 (0) M
Os03g44310.1 7 Oryza sativa 0 676 60 71 2 (2) _
Os12g42260.1 7 Oryza sativa 0 495 67 78 0 (0) M
Os12g42260.2 7 Oryza sativa 0 495 67 78 0 (0) M
Zm00001eb031930_P005 agpv5 Zea mays 0 468 73 83 0 (0) _
Zm00001eb218690_P002 agpv5 Zea mays 0 435 73 86 0 (0) _
Zm00001eb031930_P004 agpv5 Zea mays 0 449 73 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Adeno_52K(2) IF-2B(2)
TargetP:	Mitochondria (Class 4 C0.085; M0.644; S0.000; _0.266)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	642 aa (-cTP 634)
Molecular Weight	69.49 kDA(-cTP )
PI	9.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1494	Detail								leaf [A. thaliana]
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data