PPDB

The Plant Proteome Database

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AT5G38620.1   MADS-box transcription factor family protein

Lab Annot.
Mapman: 27.3.24 RNA.regulation of transcription.MADS box transcription factor family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G49420.1 11Arabidopsis thaliana036078820 (0)_
AT5G49490.1 11Arabidopsis thaliana6E-9421769790 (0)M
AT5G04640.1 11Arabidopsis thaliana1E-5236836540 (0)_
Os12g21850.1 7Oryza sativa2E-107341640 (0)_
Os12g21880.1 7Oryza sativa3E-089536610 (0)_
Os09g02830.1 7Oryza sativa4E-088435590 (0)M
GRMZM2G073357_P01 3.21Zea mays5E-107241680 (0)_
Zm00001eb286420_P001 agpv5Zea mays5E-107241680 (0)_
v1_GRMZM2G073357_P01 4a53Zea mays5E-107241680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: SRF-TF(1)
TargetP: Cytoplasm (Class 3 C0.084; M0.256; S0.021; _0.750)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 349 aa (-cTP 275)
Molecular Weight 38.85 kDA(-cTP )
PI 4.39(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help