PPDB

PPDB	The Plant Proteome Database

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AT5G38600.1 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein

Lab Annot.

Proline-rich spliceosome-associated (PSP) protein / zinc knuckle (CCHC-type) protein
Mapman: 27.1.1 RNA.processing.splicing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G38600.3 11 Arabidopsis thaliana 0 429 99 100 0 (0) _
AT5G38600.2 11 Arabidopsis thaliana 0 429 99 99 0 (0) M
AT1G67210.2 11 Arabidopsis thaliana 4E-156 409 62 73 0 (0) _
Os06g30020.1 7 Oryza sativa 5E-91 442 41 59 0 (0) _
Zm00001eb182330_P001 agpv5 Zea mays 3E-94 468 41 57 0 (0) _
Zm00001eb182330_P002 agpv5 Zea mays 1E-53 308 38 57 0 (0) _
v1_GRMZM2G149138_P01 4a53 Zea mays 5E-48 234 47 61 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Mlo(1) PSP(1) zf-CCHC(1)
TargetP:	Cytoplasm (Class 3 C0.326; M0.073; S0.067; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	532 aa (-cTP 522)
Molecular Weight	60.55 kDA(-cTP )
PI	4.98(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data