PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G38570.1   F-box/RNI-like superfamily protein

Lab Annot. F-box/RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38590.2 11Arabidopsis thaliana2E-13140555670 (0)_
AT4G10400.3 11Arabidopsis thaliana1E-10642148600 (0)_
AT4G10400.1 11Arabidopsis thaliana1E-10642148600 (0)_
Os04g35990.1 7Oryza sativa3E-1332425410 (0)M
Os10g03690.1 7Oryza sativa3E-1231126440 (0)_
Os06g36220.1 7Oryza sativa3E-1223127460 (0)_
v1_GRMZM2G115395_P01 4a53Zea mays2E-1533625440 (0)_
GRMZM2G115395_P01 3.21Zea mays2E-1533625440 (0)_
Zm00001eb082210_P002 agpv5Zea mays9E-1533025440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) F-box-like(1) FBD(2)
TargetP: Cytoplasm (Class 5 C0.013; M0.073; S0.522; _0.718)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 379 aa (-cTP 350)
Molecular Weight 44.05 kDA(-cTP )
PI 6.82(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help