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The Plant Proteome Database

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AT5G38510.1   Rhomboid-related intramembrane serine protease family protein

Lab Annot. rhomboid protease 9 (AtRBL9) - inactive form
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38510.3 11Arabidopsis thaliana04341001000 (0)C
AT5G38510.2 11Arabidopsis thaliana04341001001 (1)C
AT1G25290.2 11Arabidopsis thaliana8E-1615532510 (0)C
Os02g22100.5 7Oryza sativa1E-4724041580 (0)_
Os02g22100.6 7Oryza sativa1E-4724041580 (0)_
Os02g22100.4 7Oryza sativa1E-4724041580 (0)_
Zm00001eb204300_P001 agpv5Zea mays6E-8036840570 (0)M
Zm00001eb204300_P002 agpv5Zea mays6E-8036840570 (0)M
v1_GRMZM2G322593_P01 4a53Zea mays4E-7936840570 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Rhomboid(1) UPF0184(2)
TargetP: Chloroplast (Class 5 C0.531; M0.073; S0.037; _0.458)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 4 TMs
Aramemnon: 7 TMs
TAT position:
Length 434 aa (-cTP 366)
Molecular Weight 47.73 kDA(-cTP 39.83)
PI 5.60(-cTP 4.63)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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