PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G38350.1   Disease resistance protein (NBS-LRR class) family
Lab Annot.
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38340.2 11Arabidopsis thaliana086067780 (0)_
AT5G38340.1 11Arabidopsis thaliana086067780 (0)S
AT5G38340.3 11Arabidopsis thaliana086067780 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_14(1) AAA_16(1) AAA_18(1) AAA_22(1) AAA_24(1) ABC_tran(1) ATPase_2(1)
TargetP: Cytoplasm (Class 2 C0.064; M0.093; S0.140; _0.896)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 833 aa (-cTP 823)
Molecular Weight 95.82 kDA(-cTP )
PI 6.43(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to siliques)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help