PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G38340.1   Disease resistance protein (TIR-NBS-LRR class) family

Lab Annot.
Mapman: 20.1.7 stress.biotic.PR-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38340.3 11Arabidopsis thaliana010591001000 (0)S
AT5G38340.2 11Arabidopsis thaliana08531001000 (0)_
AT1G65850.1 11Arabidopsis thaliana0104065770 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(2) AAA_14(1) AAA_16(1) AAA_18(1) AAA_24(1) ABC_tran(1) Ank_4(1) ATPase_2(1)
TargetP: Secreted (Class 1 C0.044; M0.016; S0.902; _0.050)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 1059 aa (-cTP 1009)
Molecular Weight 120.86 kDA(-cTP )
PI 8.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help