PPDB

The Plant Proteome Database

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AT5G38170.1   Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein

Lab Annot.
Mapman: 26.21 misc.protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38160.1 11Arabidopsis thaliana8E-4410365770 (0)S
AT1G43667.1 11Arabidopsis thaliana5E-2610347640 (0)S
AT1G43666.1 11Arabidopsis thaliana4E-2510343580 (0)S
Os10g36100.1 7Oryza sativa8E-226852630 (0)S
Os05g47700.1 7Oryza sativa5E-216653660 (0)S
Os10g36070.1 7Oryza sativa3E-206653620 (0)S
Zm00001eb000850_P001 agpv5Zea mays3E-186648660 (0)S
v1_GRMZM2G137329_P01 4a53Zea mays3E-186648663 (3)S
GRMZM2G137329_P01 3.21Zea mays3E-186648660 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LTP_2(1)
TargetP: Secreted (Class 1 C0.021; M0.030; S0.981; _0.029)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 103 aa (-cTP 80)
Molecular Weight 10.94 kDA(-cTP )
PI 8.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2249Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to seeds)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help