PPDB

The Plant Proteome Database

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AT5G38050.1   RNA polymerase II transcription elongation factor

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G71080.1 11Arabidopsis thaliana7E-5427741581 (1)_
Os01g32300.2 7Oryza sativa2E-6027643600 (0)C
Os01g32300.1 7Oryza sativa4E-6027843590 (0)C
Zm00001eb217130_P001 agpv5Zea mays2E-5727544560 (0)C
AC213463.3_FGP002 3.21Zea mays2E-5727544560 (0)C
GRMZM2G080764_P01 3.21Zea mays5E-5628042560 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AF-4(1) EAF(1) Macoilin(1) Sporozoite_P67(1)
TargetP: Cytoplasm (Class 2 C0.191; M0.129; S0.093; _0.853)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 281 aa (-cTP 272)
Molecular Weight 31.19 kDA(-cTP )
PI 4.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help