PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G38020.1   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Lab Annot. S-adenosyl-L-methionine-dependent methyltransferase
Mapman: 17.8.1 hormone metabolism.salicylic acid.synthesis-degradation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G38020.2 11Arabidopsis thaliana03291001000 (0)_
AT3G21950.1 11Arabidopsis thaliana036878920 (0)_
AT3G21950.2 11Arabidopsis thaliana040072840 (0)_
Os02g48770.1 7Oryza sativa1E-7937141570 (0)_
Os01g50610.1 7Oryza sativa8E-7637739530 (0)_
Os01g50480.1 7Oryza sativa1E-7537838530 (0)_
v1_GRMZM2G133996_P01 4a53Zea mays9E-7837938530 (0)_
GRMZM2G133996_P01 3.21Zea mays9E-7837938530 (0)_
Zm00001eb199380_P001 agpv5Zea mays3E-7737738530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Methyltransf_7(1)
TargetP: Cytoplasm (Class 2 C0.089; M0.113; S0.079; _0.892)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 368 aa (-cTP 335)
Molecular Weight 41.64 kDA(-cTP )
PI 6.21(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1465Detail       leaf [A. thaliana] co-IP GST-ClpS stroma clpc1 x clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help