PPDB

The Plant Proteome Database

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AT5G37930.1   Protein with RING/U-box and TRAF-like domain

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66650.1 11Arabidopsis thaliana4E-8925854690 (0)M
AT1G66660.2 11Arabidopsis thaliana8E-7634943570 (0)C
AT5G37890.1 11Arabidopsis thaliana2E-7125644660 (0)_
Os01g55640.1 7Oryza sativa9E-2717733500 (0)_
Os06g20610.1 7Oryza sativa4E-2622528510 (0)_
Os05g06100.1 7Oryza sativa3E-2527926450 (0)_
Zm00001eb132940_P001 agpv5Zea mays2E-3834729450 (0)_
GRMZM2G008123_P01 3.21Zea mays2E-3834729450 (0)_
v1_GRMZM2G008123_P01 4a53Zea mays2E-3834729450 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1644(1) Sina(1) zf-C3HC4(1) zf-C3HC4_2(1)
TargetP: Cytoplasm (Class 3 C0.231; M0.104; S0.089; _0.780)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 349 aa (-cTP 342)
Molecular Weight 38.92 kDA(-cTP )
PI 5.42(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help