PPDB

The Plant Proteome Database

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AT5G37910.1   Protein with RING/U-box and TRAF-like domain

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G37890.1 11Arabidopsis thaliana3E-11925964760 (0)_
AT5G37900.1 11Arabidopsis thaliana3E-11226961720 (0)_
AT5G37870.1 11Arabidopsis thaliana7E-11226264740 (0)_
Os01g55640.1 7Oryza sativa1E-2519131460 (0)_
Os06g20610.1 7Oryza sativa7E-2421330460 (0)_
Os05g06100.1 7Oryza sativa8E-2220727440 (0)_
Zm00001eb132940_P001 agpv5Zea mays1E-2727928460 (0)_
GRMZM2G008123_P01 3.21Zea mays1E-2727928460 (0)_
v1_GRMZM2G008123_P01 4a53Zea mays1E-2727928460 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sina(1) zf-C3HC4_2(1) zf-C3HC4_3(2)
TargetP: Cytoplasm (Class 3 C0.174; M0.159; S0.032; _0.716)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 276 aa (-cTP 193)
Molecular Weight 30.85 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help