PPDB

PPDB	The Plant Proteome Database

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AT5G37870.1 Protein with RING/U-box and TRAF-like domain

Lab Annot.

Mapman: 33.99 development.unspecified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G37910.1 11 Arabidopsis thaliana 7E-112 262 64 74 0 (0) _
AT5G37890.1 11 Arabidopsis thaliana 2E-107 289 56 68 0 (0) _
AT5G62800.1 11 Arabidopsis thaliana 7E-83 275 48 66 0 (0) _
Os01g03290.1 7 Oryza sativa 7E-28 278 26 44 0 (0) _
Os01g55640.1 7 Oryza sativa 3E-27 130 43 57 0 (0) _
Os01g03420.1 7 Oryza sativa 4E-25 138 41 56 0 (0) _
Zm00001eb132940_P001 agpv5 Zea mays 1E-31 268 29 46 0 (0) _
GRMZM2G008123_P01 3.21 Zea mays 1E-31 268 29 46 0 (0) _
v1_GRMZM2G008123_P01 4a53 Zea mays 1E-31 268 29 46 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF1644(3) Sina(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1) zf-RING_5(1) zf-RING_
TargetP:	Cytoplasm (Class 3 C0.032; M0.285; S0.024; _0.752)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	281 aa (-cTP 191)
Molecular Weight	31.31 kDA(-cTP )
PI	8.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data