PPDB

The Plant Proteome Database

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AT5G37800.1   RHD SIX-LIKE 1

Lab Annot.
Mapman: 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66470.1 11Arabidopsis thaliana2E-11531862690 (0)_
AT1G27740.1 11Arabidopsis thaliana6E-2620533500 (0)_
AT4G33880.1 11Arabidopsis thaliana8E-247958780 (0)_
Os02g48060.1 7Oryza sativa3E-519686910 (0)_
Os01g02110.1 7Oryza sativa1E-428287950 (0)_
Os06g30090.1 7Oryza sativa7E-328267850 (0)_
Zm00001eb252360_P001 agpv5Zea mays5E-4913565730 (0)_
AC216731.3_FGP001 3.21Zea mays5E-4913565730 (0)_
v1_AC216731.3_FGP001 4a53Zea mays5E-4913565730 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: HLH(1)
TargetP: Cytoplasm (Class 5 C0.523; M0.050; S0.082; _0.708)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 307 aa (-cTP 249)
Molecular Weight 33.33 kDA(-cTP )
PI 6.08(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help