PPDB

PPDB	The Plant Proteome Database

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AT5G37560.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G25370.1 11 Arabidopsis thaliana 3E-150 382 59 72 0 (0) M
AT2G21420.1 11 Arabidopsis thaliana 1E-149 378 57 70 2 (0) _
AT2G25370.2 11 Arabidopsis thaliana 3E-134 382 55 67 3 (3) M
Os11g01240.1 7 Oryza sativa 2E-47 378 30 47 0 (0) S
Os08g35060.1 7 Oryza sativa 2E-36 217 32 51 0 (0) _
Os09g11170.1 7 Oryza sativa 3E-36 215 33 45 0 (0) _
Zm00001eb194870_P002 agpv5 Zea mays 5E-73 377 35 54 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 5E-73 377 35 54 0 (0) S
v1_GRMZM2G020996_P01 4a53 Zea mays 5E-73 377 35 54 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_4(3) FAM35_C(2) FYDLN_acid(1) IBR(3) RVT_3(1) zf-C3HC4(2) zf-RING_2(3)
TargetP:	Cytoplasm (Class 1 C0.074; M0.102; S0.104; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	444 aa (-cTP 414)
Molecular Weight	51.02 kDA(-cTP )
PI	4.89(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data