PPDB

The Plant Proteome Database

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AT5G37540.1   Eukaryotic aspartyl protease family protein

Lab Annot. aspartic protease
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G66180.1 11Arabidopsis thaliana040182882 (2)S
AT2G39710.1 11Arabidopsis thaliana3E-7943838530 (0)C
AT5G02190.1 11Arabidopsis thaliana7E-7637739540 (0)C
Os03g16500.1 7Oryza sativa2E-6441435510 (0)C
Os01g62630.1 7Oryza sativa1E-6039834480 (0)M
Os08g36540.1 7Oryza sativa1E-4137832490 (0)_
GRMZM2G026911_P01 3.21Zea mays2E-6341234510 (0)_
Zm00001eb012190_P001 agpv5Zea mays2E-6341234510 (0)_
v1_GRMZM2G026911_P01 4a53Zea mays2E-6341234510 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Asp(1) TAXi_C(1) TAXi_N(1)
TargetP: Secreted (Class 4 C0.083; M0.034; S0.451; _0.002)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon:
TAT position:
Length 442 aa (-cTP 346)
Molecular Weight 48.65 kDA(-cTP )
PI 9.27(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help