PPDB

The Plant Proteome Database

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AT5G36970.1   NDR1/HIN1-like 25

Lab Annot. NHL25 (NDR1/HIN1-LIKE 25)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G65690.1 11Arabidopsis thaliana3E-12325570810 (0)C
AT1G54540.1 11Arabidopsis thaliana3E-5324839581 (1)_
AT2G27080.2 11Arabidopsis thaliana2E-3820035550 (0)_
Os04g58090.1 7Oryza sativa2E-4125635560 (0)_
Os09g09460.1 7Oryza sativa3E-2917333570 (0)_
Os08g23460.1 7Oryza sativa4E-2815036580 (0)_
GRMZM2G093951_P01 3.21Zea mays2E-5127838560 (0)_
Zm00001eb044970_P001 agpv5Zea mays2E-5127838560 (0)_
v1_GRMZM2G093951_P01 4a53Zea mays2E-5127838560 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: LEA_2(1) Vac7(1)
TargetP: Cytoplasm (Class 2 C0.210; M0.047; S0.041; _0.840)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 248 aa (-cTP 222)
Molecular Weight 27.96 kDA(-cTP )
PI 9.89(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
430Detail        [A. thaliana]  
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
755Detail        [A. thaliana]  
1091Detail        [A. thaliana] R4Strep Complemented
1536Detail       leaf [A. thaliana] wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help